[CMake] libtool: link: only absolute run-paths are allowed

[Josh Stratton]

If I leave off the --prefix for configure, I get the /usr/local/include
permission error again.

Making install in api
 /bin/mkdir -p '/usr/local/include'
 /usr/bin/install -c -m 644
/home/stratton/Public/ppml/external/fftw-3.3.3/api/fftw3.h
/home/stratton/Public/ppml/external/fftw-3.3.3/api/fftw3.f
/home/stratton/Public/ppml/external/fftw-3.3.3/api/fftw3l.f03
/home/stratton/Public/ppml/external/fftw-3.3.3/api/fftw3q.f03
'/usr/local/include'
/usr/bin/install: cannot create regular file '/usr/local/include/fftw3.h':
Permission denied
/usr/bin/install: cannot create regular file '/usr/local/include/fftw3.f':
Permission denied
/usr/bin/install: cannot create regular file
'/usr/local/include/fftw3l.f03': Permission denied
/usr/bin/install: cannot create regular file
'/usr/local/include/fftw3q.f03': Permission denied
make[6]: *** [install-includeHEADERS] Error 1
make[5]: *** [install-am] Error 2
make[4]: *** [install] Error 2
make[3]: *** [install-recursive] Error 1
make[2]: *** [fftw-prefix/src/fftw-stamp/fftw-install] Error 2
make[1]: *** [CMakeFiles/fftw.dir/all] Error 2
make: *** [all] Error 2


ExternalProject_Add(
  fftw
  SOURCE_DIR /home/stratton/Public/ppml/external/fftw-3.3.3
  CONFIGURE_COMMAND <SOURCE_DIR>/configure ${CONFIGURE_PARALLEL_FLAG}
  CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=/tmp/ack
    PATH=$DEPLOY_DIR/FFTW
  BUILD_COMMAND make
)





On Sun, Mar 23, 2014 at 10:06 PM, Josh Stratton <strattonbrazil at gmail.com>wrote:

> When I try specifying the MAKE_INSTALL_PREFIX that way, I get the libtool
> error again.
>
> ...
> Making all in libbench2
> Making all in .
> libtool: link: only absolute run-paths are allowed
> make[5]: *** [libfftw3.la] Error 1
> make[4]: *** [all-recursive] Error 1
> make[3]: *** [all] Error 2
> make[2]: *** [fftw-prefix/src/fftw-stamp/fftw-build] Error 2
>  make[1]: *** [CMakeFiles/fftw.dir/all] Error 2
> make: *** [all] Error 2
>
>
> ExternalProject_Add(
>   fftw
>   SOURCE_DIR /home/stratton/Public/ppml/external/fftw-3.3.3
>   CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=$DEPLOY_DIR/FFTW
> ${CONFIGURE_PARALLEL_FLAG}
>   CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=/tmp/ack
>     PATH=$DEPLOY_DIR/FFTW
>   BUILD_COMMAND make
> )
>
>
>
>
> On Sun, Mar 23, 2014 at 5:34 PM, Josh Stratton <strattonbrazil at gmail.com>wrote:
>
>> Looking at the docs it used a colon with the path afterward. What's
>> the PATH variable for then?
>>
>> On 3/23/14, Michael Jackson <mike.jackson at bluequartz.net> wrote:
>> > CMAKE_INSTALL_PREFIX needs an argument which is where you want FFTW
>> > installed. The Default value for CMAKE_INSTALL_PREFIX on Unix type
>> machines
>> > is /usr/local. So your CMake code needs to have something like
>> > ExternalProject_Add(
>> >   fftw
>> >   SOURCE_DIR /home/stratton/Public/ppml/external/fftw-3.3.3
>> >   CONFIGURE_COMMAND <SOURCE_DIR>/configure ${CONFIGURE_PARALLEL_FLAG}
>> >   CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=/home/stratton/Public/ppml/FFTW
>> >     PATH=$DEPLOY_DIR/FFTW
>> >   BUILD_COMMAND make
>> > )
>> >
>> >
>> > Mike Jackson
>> >
>> > On Mar 23, 2014, at 7:33 PM, Josh Stratton <strattonbrazil at gmail.com>
>> > wrote:
>> >
>> >> I've using cmake to build an autoconf portion of the project using
>> >> ExternalProject_Add.  I tried using the autoconf prefix, but was having
>> >> issues with the libtool and absolute paths.  I found
>> DCMAKE_INSTALL_PREFIX
>> >> in the docs, which seems to avoid the libtool problem, but I'm getting
>> >> errors saying I don't have permissions writing files to
>> >> /usr/local/include.  Why would it be trying to write files there?
>> >>
>> >> Making install in api
>> >>  /bin/mkdir -p '/usr/local/include'
>> >>  /usr/bin/install -c -m 644
>> >> /home/stratton/Public/ppml/external/fftw-3.3.3/api/fftw3.h
>> >> /home/stratton/Public/ppml/external/fftw-3.3.3/api/fftw3.f
>> >> /home/stratton/Public/ppml/external/fftw-3.3.3/api/fftw3l.f03
>> >> /home/stratton/Public/ppml/external/fftw-3.3.3/api/fftw3q.f03
>> >> '/usr/local/include'
>> >> /usr/bin/install: cannot create regular file
>> '/usr/local/include/fftw3.h':
>> >> Permission denied
>> >> /usr/bin/install: cannot create regular file
>> '/usr/local/include/fftw3.f':
>> >> Permission denied
>> >> /usr/bin/install: cannot create regular file
>> >> '/usr/local/include/fftw3l.f03': Permission denied
>> >> /usr/bin/install: cannot create regular file
>> >> '/usr/local/include/fftw3q.f03': Permission denied
>> >> make[6]: *** [install-includeHEADERS] Error 1
>> >> make[5]: *** [install-am] Error 2
>> >> make[4]: *** [install] Error 2
>> >> make[3]: *** [install-recursive] Error 1
>> >> make[2]: *** [fftw-prefix/src/fftw-stamp/fftw-install] Error 2
>> >> make[1]: *** [CMakeFiles/fftw.dir/all] Error 2
>> >> make: *** [all] Error 2
>> >>
>> >> *** And part of my cmake file...
>> >>
>> >> SET(DEPLOY_DIR /tmp/foo)
>> >>
>> >> ExternalProject_Add(
>> >>   fftw
>> >>   SOURCE_DIR /home/stratton/Public/ppml/external/fftw-3.3.3
>> >>   CONFIGURE_COMMAND <SOURCE_DIR>/configure ${CONFIGURE_PARALLEL_FLAG}
>> >>   CMAKE_ARGS -DCMAKE_INSTALL_PREFIX:
>> >>     PATH=$DEPLOY_DIR/FFTW
>> >>   BUILD_COMMAND make
>> >> )
>> >>
>> >> --
>> >>
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