[CMake] BundleUtilities Question on Linux: Libraries Not Found during fixup?
Arnaud GELAS
arnaud_gelas at hms.harvard.edu
Tue Apr 20 15:46:31 EDT 2010
Hi Kent,
Have you tried to export the paths (to the dynamic libraries) before
making the package?
(Note it works on my project)
my 2cts,
Arnaud
On 04/20/2010 03:42 PM, kent williams wrote:
> Well I found the magic incantation on OS X to get fixup_bundle work.
> Now I'd like it to work on Linux.
>
> What's happening is I get many of these messages:
>
> warning: cannot resolve item 'not'
>
> The problem comes, as near as I can figure out, from when ldd is run
> to discover the library prerequisites. Running ldd generates a lot of
> lines like this:
> libQVTK.so.5.4 => not found
> libQtGui.so.4 => not found
>
> So the solution seems pretty clear -- if you're on linux, use the
> directory list passed into fixup_bundle in order to set
> LD_LIBRARY_PATH before running ldd. Otherwise fixup_bundle seems to
> want to fix up all sorts of libraries named 'not' and fails.
>
> I'd just fix it myself but my CMake-fu isn't strong enough to hack
> BundleUtilities.cmake
>
> For now I think I'll just turn off fixup_bundle on Linux...
>
> compute22 106% ldd BRAINSTracerQT
> libQVTK.so.5.4 => not found
> libQtGui.so.4 => not found
> libpng12.so.0 => /usr/lib64/libpng12.so.0 (0x0000003a22d00000)
> libSM.so.6 => /usr/X11R6/lib64/libSM.so.6 (0x0000003a1f200000)
> libICE.so.6 => /usr/X11R6/lib64/libICE.so.6 (0x0000003a1f000000)
> libXrender.so.1 => /usr/X11R6/lib64/libXrender.so.1 (0x0000003a1fc00000)
> libfreetype.so.6 => /usr/lib64/libfreetype.so.6 (0x0000003a1f400000)
> libfontconfig.so.1 => /usr/lib64/libfontconfig.so.1 (0x0000003a1fa00000)
> libXext.so.6 => /usr/X11R6/lib64/libXext.so.6 (0x0000003a1ee00000)
> libX11.so.6 => /usr/X11R6/lib64/libX11.so.6 (0x0000003a1ea00000)
> libQtCore.so.4 => not found
> libz.so.1 => /usr/lib64/libz.so.1 (0x0000003a1e800000)
> libgthread-2.0.so.0 => /usr/lib64/libgthread-2.0.so.0 (0x0000003a24c00000)
> libglib-2.0.so.0 => /usr/lib64/libglib-2.0.so.0 (0x0000003a20a00000)
> libgobject-2.0.so.0 => /usr/lib64/libgobject-2.0.so.0 (0x0000003a20e00000)
> librt.so.1 => /lib64/tls/librt.so.1 (0x0000003a23600000)
> libpthread.so.0 => /lib64/tls/libpthread.so.0 (0x0000003a1ec00000)
> libdl.so.2 => /lib64/libdl.so.2 (0x0000003a1e600000)
> libITKAlgorithms.so.3.18 => not found
> libITKStatistics.so.3.18 => not found
> libITKFEM.so.3.18 => not found
> libitkNetlibSlatec.so.3.18 => not found
> libitkv3p_lsqr.so.3.18 => not found
> libITKEXPAT.so.3.18 => not found
> libitksys.so.3.18 => not found
> libvtkRenderingAddOn.so => not found
> libvtkRendering.so.5.4 => not found
> libvtkFiltering.so.5.4 => not found
> libvtkVolumeRendering.so.5.4 => not found
> libtcl8.4.so => /usr/lib64/libtcl8.4.so (0x0000002a95594000)
> libModuleDescriptionParser.so => not found
> libvtkQtChart.so.5.4 => not found
> libQtOpenGL.so.4 => not found
> libGLU.so.1 => /usr/X11R6/lib64/libGLU.so.1 (0x0000003a21800000)
> libGL.so.1 => /usr/X11R6/lib64/libGL.so.1 (0x0000003a21400000)
> libm.so.6 => /lib64/tls/libm.so.6 (0x0000003a1e400000)
> libQtSql.so.4 => not found
> libvtkViews.so.5.4 => not found
> libvtkInfovis.so.5.4 => not found
> libvtklibxml2.so.5.4 => not found
> libvtkalglib.so.5.4 => not found
> libITKNumerics.so.3.18 => not found
> libITKBasicFilters.so.3.18 => not found
> libITKIO.so.3.18 => not found
> libITKNrrdIO.so.3.18 => not found
> libitkgdcm.so.3.18 => not found
> libitkjpeg12.so.3.18 => not found
> libitkjpeg16.so.3.18 => not found
> libitkopenjpeg.so.3.18 => not found
> libuuid.so.1 => /lib64/tls/libuuid.so.1 (0x0000002a95758000)
> libitkpng.so.3.18 => not found
> libitktiff.so.3.18 => not found
> libitkjpeg8.so.3.18 => not found
> libITKSpatialObject.so.3.18 => not found
> libITKCommon.so.3.18 => not found
> libitkvnl_inst.so.3.18 => not found
> libitkvnl_algo.so.3.18 => not found
> libitkv3p_netlib.so.3.18 => not found
> libitkvnl.so.3.18 => not found
> libitkvcl.so.3.18 => not found
> libITKMetaIO.so.3.18 => not found
> libITKDICOMParser.so.3.18 => not found
> libITKniftiio.so.3.18 => not found
> libITKznz.so.3.18 => not found
> libitkzlib.so.3.18 => not found
> libvtkWidgets.so.5.4 => not found
> libvtkHybrid.so.5.4 => not found
> libvtkGraphics.so.5.4 => not found
> libvtkverdict.so.5.4 => not found
> libvtkImaging.so.5.4 => not found
> libvtkftgl.so.5.4 => not found
> libvtkfreetype.so.5.4 => not found
> libXt.so.6 => /usr/X11R6/lib64/libXt.so.6 (0x0000003a23e00000)
> libXss.so.1 => /usr/X11R6/lib64/libXss.so.1 (0x0000003a26900000)
> libXft.so.2 => /usr/X11R6/lib64/libXft.so.2 (0x0000003a20400000)
> libvtkIO.so.5.4 => not found
> libvtkCommon.so.5.4 => not found
> libvtkDICOMParser.so.5.4 => not found
> libvtkmetaio.so.5.4 => not found
> libvtksqlite.so.5.4 => not found
> libvtkpng.so.5.4 => not found
> libvtktiff.so.5.4 => not found
> libvtkzlib.so.5.4 => not found
> libvtkjpeg.so.5.4 => not found
> libvtkexpat.so.5.4 => not found
> libvtksys.so.5.4 => not found
> libvtkexoIIc.so.5.4 => not found
> libvtkNetCDF.so.5.4 => not found
> libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x0000003a20c00000)
> libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x0000003a20600000)
> libc.so.6 => /lib64/tls/libc.so.6 (0x0000003a1e100000)
> libexpat.so.0 => /usr/lib64/libexpat.so.0 (0x0000003a1f600000)
> /lib64/ld-linux-x86-64.so.2 (0x0000003a1df00000)
> libXxf86vm.so.1 => /usr/X11R6/lib64/libXxf86vm.so.1 (0x0000003a21e00000)
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