[CMake] BundleUtilities Question on Linux: Libraries Not Found during fixup?

[Clinton Stimpson]

I've already made a patch to fix this problem and put it in the bug tracker 
(along with a couple other patches).

Clint

On Tuesday 20 April 2010 01:42:50 pm kent williams wrote:
> Well I found the magic incantation on OS X to get fixup_bundle work.
> Now I'd like it to work on Linux.
> 
> What's happening is I get many of these messages:
> 
> warning: cannot resolve item 'not'
> 
> The problem comes, as near as I can figure out, from when ldd is run
> to discover the library prerequisites.  Running ldd generates a lot of
> lines like this:
> 	libQVTK.so.5.4 => not found
> 	libQtGui.so.4 => not found
> 
> So the solution seems pretty clear -- if you're on linux, use the
> directory list passed into fixup_bundle in order to set
> LD_LIBRARY_PATH before running ldd. Otherwise fixup_bundle seems to
> want to fix up all sorts of libraries named 'not' and fails.
> 
> I'd just fix it myself but my CMake-fu isn't strong enough to hack
> BundleUtilities.cmake
> 
> For now I think I'll just turn off fixup_bundle on Linux...
> 
> compute22 106% ldd BRAINSTracerQT
> 	libQVTK.so.5.4 => not found
> 	libQtGui.so.4 => not found
> 	libpng12.so.0 => /usr/lib64/libpng12.so.0 (0x0000003a22d00000)
> 	libSM.so.6 => /usr/X11R6/lib64/libSM.so.6 (0x0000003a1f200000)
> 	libICE.so.6 => /usr/X11R6/lib64/libICE.so.6 (0x0000003a1f000000)
> 	libXrender.so.1 => /usr/X11R6/lib64/libXrender.so.1 (0x0000003a1fc00000)
> 	libfreetype.so.6 => /usr/lib64/libfreetype.so.6 (0x0000003a1f400000)
> 	libfontconfig.so.1 => /usr/lib64/libfontconfig.so.1 (0x0000003a1fa00000)
> 	libXext.so.6 => /usr/X11R6/lib64/libXext.so.6 (0x0000003a1ee00000)
> 	libX11.so.6 => /usr/X11R6/lib64/libX11.so.6 (0x0000003a1ea00000)
> 	libQtCore.so.4 => not found
> 	libz.so.1 => /usr/lib64/libz.so.1 (0x0000003a1e800000)
> 	libgthread-2.0.so.0 => /usr/lib64/libgthread-2.0.so.0 (0x0000003a24c00000)
> 	libglib-2.0.so.0 => /usr/lib64/libglib-2.0.so.0 (0x0000003a20a00000)
> 	libgobject-2.0.so.0 => /usr/lib64/libgobject-2.0.so.0 (0x0000003a20e00000)
> 	librt.so.1 => /lib64/tls/librt.so.1 (0x0000003a23600000)
> 	libpthread.so.0 => /lib64/tls/libpthread.so.0 (0x0000003a1ec00000)
> 	libdl.so.2 => /lib64/libdl.so.2 (0x0000003a1e600000)
> 	libITKAlgorithms.so.3.18 => not found
> 	libITKStatistics.so.3.18 => not found
> 	libITKFEM.so.3.18 => not found
> 	libitkNetlibSlatec.so.3.18 => not found
> 	libitkv3p_lsqr.so.3.18 => not found
> 	libITKEXPAT.so.3.18 => not found
> 	libitksys.so.3.18 => not found
> 	libvtkRenderingAddOn.so => not found
> 	libvtkRendering.so.5.4 => not found
> 	libvtkFiltering.so.5.4 => not found
> 	libvtkVolumeRendering.so.5.4 => not found
> 	libtcl8.4.so => /usr/lib64/libtcl8.4.so (0x0000002a95594000)
> 	libModuleDescriptionParser.so => not found
> 	libvtkQtChart.so.5.4 => not found
> 	libQtOpenGL.so.4 => not found
> 	libGLU.so.1 => /usr/X11R6/lib64/libGLU.so.1 (0x0000003a21800000)
> 	libGL.so.1 => /usr/X11R6/lib64/libGL.so.1 (0x0000003a21400000)
> 	libm.so.6 => /lib64/tls/libm.so.6 (0x0000003a1e400000)
> 	libQtSql.so.4 => not found
> 	libvtkViews.so.5.4 => not found
> 	libvtkInfovis.so.5.4 => not found
> 	libvtklibxml2.so.5.4 => not found
> 	libvtkalglib.so.5.4 => not found
> 	libITKNumerics.so.3.18 => not found
> 	libITKBasicFilters.so.3.18 => not found
> 	libITKIO.so.3.18 => not found
> 	libITKNrrdIO.so.3.18 => not found
> 	libitkgdcm.so.3.18 => not found
> 	libitkjpeg12.so.3.18 => not found
> 	libitkjpeg16.so.3.18 => not found
> 	libitkopenjpeg.so.3.18 => not found
> 	libuuid.so.1 => /lib64/tls/libuuid.so.1 (0x0000002a95758000)
> 	libitkpng.so.3.18 => not found
> 	libitktiff.so.3.18 => not found
> 	libitkjpeg8.so.3.18 => not found
> 	libITKSpatialObject.so.3.18 => not found
> 	libITKCommon.so.3.18 => not found
> 	libitkvnl_inst.so.3.18 => not found
> 	libitkvnl_algo.so.3.18 => not found
> 	libitkv3p_netlib.so.3.18 => not found
> 	libitkvnl.so.3.18 => not found
> 	libitkvcl.so.3.18 => not found
> 	libITKMetaIO.so.3.18 => not found
> 	libITKDICOMParser.so.3.18 => not found
> 	libITKniftiio.so.3.18 => not found
> 	libITKznz.so.3.18 => not found
> 	libitkzlib.so.3.18 => not found
> 	libvtkWidgets.so.5.4 => not found
> 	libvtkHybrid.so.5.4 => not found
> 	libvtkGraphics.so.5.4 => not found
> 	libvtkverdict.so.5.4 => not found
> 	libvtkImaging.so.5.4 => not found
> 	libvtkftgl.so.5.4 => not found
> 	libvtkfreetype.so.5.4 => not found
> 	libXt.so.6 => /usr/X11R6/lib64/libXt.so.6 (0x0000003a23e00000)
> 	libXss.so.1 => /usr/X11R6/lib64/libXss.so.1 (0x0000003a26900000)
> 	libXft.so.2 => /usr/X11R6/lib64/libXft.so.2 (0x0000003a20400000)
> 	libvtkIO.so.5.4 => not found
> 	libvtkCommon.so.5.4 => not found
> 	libvtkDICOMParser.so.5.4 => not found
> 	libvtkmetaio.so.5.4 => not found
> 	libvtksqlite.so.5.4 => not found
> 	libvtkpng.so.5.4 => not found
> 	libvtktiff.so.5.4 => not found
> 	libvtkzlib.so.5.4 => not found
> 	libvtkjpeg.so.5.4 => not found
> 	libvtkexpat.so.5.4 => not found
> 	libvtksys.so.5.4 => not found
> 	libvtkexoIIc.so.5.4 => not found
> 	libvtkNetCDF.so.5.4 => not found
> 	libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x0000003a20c00000)
> 	libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x0000003a20600000)
> 	libc.so.6 => /lib64/tls/libc.so.6 (0x0000003a1e100000)
> 	libexpat.so.0 => /usr/lib64/libexpat.so.0 (0x0000003a1f600000)
> 	/lib64/ld-linux-x86-64.so.2 (0x0000003a1df00000)
> 	libXxf86vm.so.1 => /usr/X11R6/lib64/libXxf86vm.so.1 (0x0000003a21e00000)
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